Man pages for timjmiller/wham
Woods Hole Assessment Model (WHAM)

check_convergenceCheck convergence of WHAM model
check_estimabilityCheck for identifiability of fixed effects Originally...
compare_wham_modelsCompare multiple WHAM (or ASAP) models
extract_fixedExtract fixed effects Originally provided by...
fit_peelFit model peeling off _i_ years of data
fit_tmbFit TMB model using nlminb
fit_whamFit WHAM model
make_osa_residualsCalculate one-step-ahead residuals
mohns_rhoCalculate Mohn's rho for a WHAM model with peels
pipePipe function
plot_wham_outputPlot WHAM output
prepare_projectionPrepare input data and parameters to project an already fit...
prepare_wham_inputPrepare input data and parameters for WHAM model
project_whamProject a fit WHAM model
read_asap3_datRead an ASAP3 .dat file into R
read_asap3_fitRead ASAP3 fit
read_wham_fitRead WHAM fit
retroRun retrospective analysis
retro_resExtract retrospective results for plotting
set_age_sel0Make one or more selectivity blocks with age-specific...
wham_htmlCreate HTML file to view output plots in browser
timjmiller/wham documentation built on Nov. 23, 2023, 2:46 a.m.