get_hippo_diffexp: Return hippo_diffexp object

Description Usage Arguments Value Examples

View source: R/hippo.R

Description

Return hippo_diffexp object

Usage

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get_hippo_diffexp(sce, k = 1)

Arguments

sce

SingleCellExperiment object with hippo

k

integer round of result of interest

Value

data frame of differential expression test

Examples

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data(toydata)
set.seed(20200505)
toydata = hippo(toydata,
          feature_method = "zero_inflation",
          clustering_method = "kmeans",
          K = 4,
          outlier_proportion = 0.00001)
toydata = hippo_diffexp(toydata, method = "gaus")
result1 = get_hippo_diffexp(toydata)

tk382/HIPPO documentation built on Aug. 17, 2021, 2:29 p.m.