##' Compile a latex document and
##'
##' @param filename character string, name of latex document
##' @param latexmode character string, should be either "latex" or "pdflatex"
##' Both modes will give a pdf document at the end,
##' but use "latex" if document has eps figures (tex -> dvi -> pdf)
##' and use "pdflatex" if document has pdf figures (tex -> pdf)
##' @param intern logical, passed to a system() command
##'
##' @export
compileLatexDoc = function(filename, latexmode="latex", intern=TRUE) {
## go to the directory where the file is stored
nowdir = getwd();
filedir = dirname(filename);
filebase = basename(filename);
setwd(filedir);
## perform the compilation
## compile twice to get all references, page numbers, table of contents right
if (latexmode=="latex") {
system(paste("latex ",filename,sep=""), intern=intern);
system(paste("latex ",filename,sep=""), intern=intern);
## get the dvi filename and make the pdf
filename2 = substring(filename, 1, nchar(filename)-3);
filename2 = paste(filename2, "dvi",sep="");
system(paste("dvipdf ",filename2,sep=""), intern=intern);
} else {
## for pdflatex, it is a one command operation
system(paste("pdflatex ",filebase,sep=""), intern=intern);
system(paste("pdflatex ",filebase,sep=""), intern=intern);
}
## return to the original directory
setwd(nowdir);
}
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