calc_kruskal_test: Perform Kruskal-Wallis rank sum test in multiple rows and...

Description Usage Arguments

View source: R/calc_kruskal_test.R

Description

Perform Kruskal-Wallis rank sum test in multiple rows and correct p-values.

Usage

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calc_kruskal_test(x, groupA, groupB, complete_match = FALSE,
  padj_method = "BH")

Arguments

x

Input dataframe

groupA

Character vector containing identifiers from samples of groupA. You can also use partial matching.

groupB

Character vector containing identifiers from samples of groupB. You can use partial matching.

complete_match

Logical with default value FALSE, allowing partial matching for groupA and groupB. If you want to use exact match, switch to TRUE.

padj_method

Method for adjustment of p-values for multiple hypothesis testing error (see link{p.adjust} for more info). Default method is "BH".


tkostas/komics documentation built on May 24, 2019, 7:31 a.m.