TCGA_barcode: Parse TCGA barcode.
In traversc/trqwe: Performance oriented statistical metrics and utility functions.
Description
Usage
Arguments
Value
Examples
Description
Taking in a full TCGA sample barcode, or any subset of the barcode, and return extracted values.
Usage
1
TCGA_barcode(x, what = "patient")
Arguments
x
TCGA barcode, or a vector of barcodes.
what
Which information to return.
Value
The specified information contained in the barcode of the same length as x.
Examples
1
2
3
TCGA_barcode(c("TCGA-02-0001-01C-01D-0182-01", "TCGA-02-0001-11C-01D-0182-01"), what="tissue")
[1] "01" "11"
traversc/trqwe documentation built on Dec. 4, 2020, 4:21 a.m.
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Description Usage Arguments Value Examples
Description
Taking in a full TCGA sample barcode, or any subset of the barcode, and return extracted values.
Usage
1 | TCGA_barcode(x, what = "patient")
|
Arguments
x |
TCGA barcode, or a vector of barcodes. |
what |
Which information to return. |
Value
The specified information contained in the barcode of the same length as x.
Examples
1 2 3 | TCGA_barcode(c("TCGA-02-0001-01C-01D-0182-01", "TCGA-02-0001-11C-01D-0182-01"), what="tissue")
[1] "01" "11"
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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