genomicFilesFromBeds | create a GenomicFiles from the results of sesamizeToBeds (or... |
HMM_CpG_islands.hg38 | Hidden Markov Model (HMM) based CpG island boundaries for... |
read.methdf5 | process an IDATs directly into an RGChannelSet backed by HDF5 |
read.methdf5.sheet | process as sample sheet directly into an RGChannelSet backed... |
sesamizeToBeds | process IDAT pairs directly into tabix'ed BED files using... |
tabixedToGr | Scan Tabix'ed files into a merged GRangesList (for... |
tabixFileListToGr | Scan a TabixFileList into a joint GRanges by union()'ing each... |
tabixToGr | Scan a single Tabix'ed file's ranges (only!) into a GRanges... |
verifyChannel | Verify that a channel of an HDF5 RGChannelSet matches its... |
verifyRGsets | Verify that an RGChannelSet backed by HDF5 files matches an... |
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