read_taxon_table: A function to read taxon table produced by summarize_taxa.py

Description Usage Arguments Value Author(s)

View source: R/microbiomics.r

Description

This functions reads a summarize_taxa.py output file as an R data frame

Usage

1
read_taxon_table(filename, lvl = 6)

Arguments

filename

taxon table file to read

lvl

taxonomic level to read (default = 6, genera)

Value

a data frame with the taxonomic data

Author(s)

Tommi Vatanen <tommivat@gmail.com>


tvatanen/microbiomics documentation built on Sept. 27, 2019, 7:29 a.m.