Man pages for unistbig/bimir
Condition-Specific microRNA Target Prediction by Biclustering of Large Transcriptome Data
| bicluster_extension_process | Bicluster extension process |
| bicluster_trimming_process | Bicluster trimming process |
| comatrix | Pariwise distance matrix for the entire list of biclusters |
| expCondition | Get experimantal condition information |
| genelist | A list of genes |
| getAllmiRNATargetIndex | Load human miRNA target index |
| getGenelist | Load human gene list |
| getmiRNAlist | Load human miRNA list |
| getMIRprofile | Get MIRprofile |
| get_miR_target | Get sequence-based miRNA targets |
| get_zero_rate | Get zero rate |
| load_FCtable | load_FCtable |
| make_biclust | Make all biclusters |
| merge | Merging similar biclusters |
| merge_bicluster | Merging similar biclusters |
| miRNAlist | A list of microRNAs |
| miRNATargets | miRNA binding targets |
| PBE | Progressive bicluster extension |
| PBE_MERGE | Progressive extension and merging of biclusters |
| similarity | Calculate similarity of two biclusters |
| size | Get matrix size |
