plot_graph_map: Plot an admixture graph on a map
In uqrmaie1/admixtools: Inferring demographic history from genetic data
plot_graph_map R Documentation
Plot an admixture graph on a map
Description
Plot an admixture graph on a map
Usage
plot_graph_map(graph, leafcoords, shapedata = NULL)
Arguments
graph
a two column matrix specifying the admixture graph. first column is source node,
second column is target node. the first edge has to be root -> outgroup.
admixture nodes are inferred as those nodes which are the targets of two different sources.
leafcoords
data frame with columns group, lon, lat
shapedata
shapedata
Value
a plotly object
Examples
plot_graph_map(example_igraph, example_anno)
uqrmaie1/admixtools documentation built on Nov. 3, 2024, 12:56 a.m.
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| plot_graph_map | R Documentation |
Plot an admixture graph on a map
Description
Plot an admixture graph on a map
Usage
plot_graph_map(graph, leafcoords, shapedata = NULL)
Arguments
graph |
a two column matrix specifying the admixture graph. first column is source node, second column is target node. the first edge has to be root -> outgroup. admixture nodes are inferred as those nodes which are the targets of two different sources. |
leafcoords |
data frame with columns |
shapedata |
shapedata |
Value
a plotly object
Examples
plot_graph_map(example_igraph, example_anno)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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