resample_inds: Run models while leaving out individuals

In uqrmaie1/admixtools: Inferring demographic history from genetic data

Run models while leaving out individuals

Description

These are wrapper functions around various qp functions, which will evaluate many models at once. The models are formed by leaving out every individual which belongs to a population with more than one sample, one at a time.

Usage

qp3pop_resample_inds(dir, inds, pops, verbose = TRUE, ...)

qpdstat_resample_inds(dir, inds, pops, verbose = TRUE, ...)

qpwave_resample_inds(dir, inds, pops, verbose = TRUE, ...)

qpadm_resample_inds(dir, inds, pops, verbose = TRUE, ...)

qpgraph_resample_inds(dir, inds, pops, verbose = TRUE, ...)

Arguments

dir	directory with precomputed data
inds	vector of individual names
pops	vector of population names. Should be the same length as inds
verbose	print progress updates
...	named arguments passed to the qp function.

Value

a nested data frame where each model is a row, and the columns are model parameters and model outputs

Examples

## Not run: 
res = qpadm_resample_inds
unnest(res, weights)

## End(Not run)

uqrmaie1/admixtools documentation built on Nov. 3, 2024, 12:56 a.m.