composeExport: Create dataset for secondary reviewer export from assessment...

In ut-ir-tools/irTools: R-tools for generating Utah's Integrated Report on water quality

Create dataset for secondary reviewer export from assessment dashboard

Description

Pulls columns of interest from prepped data and calculates basic exceedance summaries for site-use-parameter assessments.

Usage

composeExport(
  prepped_data,
  toxics_assessed,
  conventionals_assessed,
  include_rejected = TRUE,
  rejected_data,
  create_workbooks = FALSE,
  params = c("Mercury", "pH", "Max. Temperature", "Arsenic", "Cadmium", "Chromium",
    "Aluminum", "Total Ammonia as N", "Calcium", "Minimum Dissolved Oxygen", "Hardness",
    "Magnesium", "Nitrate as N"),
  path
)

Arguments

prepped_data	A list of objects produced by dataPrep function, including toxics, conventionals, and ecoli dataframes.
toxics_assessed	A dataframe object of toxic assessments from the assessExcCounts function.
conventionals_assessed	A dataframe object of conventionals assessments from the assessExcCounts function.
include_rejected	A logical argument to specify whether the export workbooks should include rejected data or not. Defaults to true.
rejected_data	A dataframe object with all of the data screened out using the laboratory, media, detection-quantitation limit, parameter translation tables, and data prep screens. This is only required if include_rejected = TRUE.
create_workbooks	A logical argument to specify whether workbooks should be made of the specified parameters. Defaults to FALSE.
params	A vector of assessment parameter names to be placed in workbooks.
path	A folder path name in which to drop the exported workbooks. Only required if create_workbooks is true.

Value

A list composed of three dataframes: site-date-use-param records linked with aggregated daily values (if applicable), calculations, and exceedances, site-use-param summaries including sample and exceedance counts, and prepped E.coli data.

ut-ir-tools/irTools documentation built on Jan. 19, 2024, 6:55 p.m.