Description Usage Arguments Examples
Create and save violin plots as .pdf, in "OutDir". It requires (and calls) "vioplot" package. If mdlink =T, it inserts a .pdf and a .png link in the markdown report, set by "path_of_report". The .png version is not created, only the link is put in place, not to overwrite previous versions.
1 2 3 4 5 | wviostripchart_list(yalist, ..., pch = 23, viocoll = 0, vioborder = 1,
bg = 0, coll = "black", metod = "jitter", jitter = 0.1,
plotname = as.character(substitute(yalist)), sub = NULL, ylb = "",
incrBottMarginBy = 0, savefile = UnlessSpec("b.save.wplots"),
w = UnlessSpec("b.defSize", 7), h = w, mdlink = ww.set.mdlink())
|
yalist |
Input list to be plotted. |
... |
Pass any other parameter of the corresponding plotting function (most of them should work). |
pch |
Define the symbol for each data point. A number [0-25] or any string between ""-s. |
viocoll |
Background color of each individual violing plot. |
vioborder |
Border color of each individual violing plot. |
bg |
Background color. |
metod |
Method for displaying data points to avoid overlap; either"jitter" or "stack". See stripchart(). |
jitter |
The amount of horizontal scatter added to the individual data points (to avoid overlaps). |
plotname |
Title of the plot (main parameter) and also the name of the file. |
sub |
Subtitle below the plot. |
ylb |
Y-axis label. |
incrBottMarginBy |
Increase the blank space at the bottom of the plot. Use if labels do not fit on the plot. |
savefile |
Save plot as pdf in OutDir, TRUE by default. |
w |
Width of the saved pdf image, in inches. |
h |
Height of the saved pdf image, in inches. |
mdlink |
Insert a .pdf and a .png image link in the markdown report, set by "path_of_report". |
col |
Color of the plot.l |
1 | wviostripchart_list (yalist = , ... = , pch = 23, viocoll = 0, vioborder = 1, ylb = , plotname = as.character(substitute(yalist)), sub = F, bg = 0, coll = black, metod = jitter, jitter = 0.1, w = 7, h = w, incrBottMarginBy = 0, mdlink = F)
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