wvenn: wvenn

In vertesy/MarkdownReportsDev: Generate Scientific Figures and Reports Easily

Description

Save venn diagrams. Unlike other ~vplot funcitons, this saves directly into a .png, and it does not use the dev.copy2pdf() function.

Usage

wvenn(
  yourlist,
  imagetype = "png",
  alpha = 0.5,
  fill = 1:length(yourlist),
  subt,
  ...,
  w = unless.specified("b.defSize", 7),
  h = w,
  mdlink = ww.set.mdlink(),
  plotname = substitute(yourlist),
  openFolder = T
)

Arguments

yourlist	The variable to plot.
imagetype	Image format, png by default.
alpha	Transparency, .5 by default.
fill	Background color vec
subt	Subtitle
...	Pass any other parameter of the corresponding venn.diagram() function(most of them should work).
w	Width of the saved pdf image, in inches.
h	Height of the saved pdf image, in inches.
mdlink	Insert a .pdf and a .png image link in the markdown report, set by "path_of_report".
plotname	Manual plotname parameter
openFolder	open current directory (=working if setup_MarkdownReports('setDir=T'))

Examples

TwoSets = list("set1" = LETTERS[1:6], "set2" = LETTERS[3:9] )
wvenn (yourlist = TwoSets, imagetype = "png", alpha = 0.5, w = 7, mdlink = FALSE)

vertesy/MarkdownReportsDev documentation built on Nov. 15, 2021, 9:59 a.m.