AreTheseCellNamesTheSame: AreTheseCellNamesTheSame

In vertesy/Seurat.utils: Seurat.utils - utility functions for Seurat

AreTheseCellNamesTheSame

Description

Assert and compare two character vectors (e.g.: cell IDs) how much they overlap and plot a Venn Diagram. The function aborts with an error if overlap is too small.

Usage

AreTheseCellNamesTheSame(
  vec1 = names(UVI.annot),
  vec2 = names(nr_UVI),
  names = c("Cells in Targ.Ampl", "Cells in GEX"),
  min.overlap = 0.33
)

Arguments

vec1	Character vector, eg. with cell names
vec2	Character vector, eg. with cell names
names	Names for plotting
min.overlap	Threshold below there is no there is no meaningful overlap between the two vectors.

Examples

# reTheseCellNamesTheSame()

vertesy/Seurat.utils documentation built on Dec. 4, 2024, 5:20 p.m.