copyMiscElements: Copy Specified Elements from One Seurat Object's @misc to...
In vertesy/Seurat.utils: Seurat.utils - utility functions for Seurat
copyMiscElements R Documentation
Copy Specified Elements from One Seurat Object's @misc to Another's
Description
Copies specified elements from the @misc slot of one Seurat object to the @misc slot
of another. It warns if some specified elements are missing in the source object or if elements are
overwritten in the destination object, depending on the overwrite argument.
Usage
copyMiscElements(obj.from, obj.to, elements.needed, overwrite = TRUE)
Arguments
obj.from
The source Seurat object from which elements in the @misc slot are to be copied.
obj.to
The destination Seurat object to which elements in the @misc slot are to be copied.
elements.needed
A vector of strings specifying the names of the elements in the @misc slot of
obj.from that should be copied to obj.to.
overwrite
Logical indicating whether to overwrite elements in obj.to that already exist.
If TRUE, existing elements will be overwritten with a warning; if FALSE, the function will
stop with an error if it tries to copy an element that already exists in obj.to.
Value
Returns the modified destination Seurat object (obj.to) with the specified elements
added to or updated in its @misc slot.
Examples
# Assuming `obj1` and `obj2` are Seurat objects and you wish to copy specific elements
# from obj1 to obj2, possibly overwriting existing elements in obj2
obj2 <- copyMiscElements(obj1, obj2, c("element1", "element2"), overwrite = TRUE)
vertesy/Seurat.utils documentation built on Dec. 4, 2024, 5:20 p.m.
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| copyMiscElements | R Documentation |
Copy Specified Elements from One Seurat Object's @misc to Another's
Description
Copies specified elements from the @misc slot of one Seurat object to the @misc slot
of another. It warns if some specified elements are missing in the source object or if elements are
overwritten in the destination object, depending on the overwrite argument.
Usage
copyMiscElements(obj.from, obj.to, elements.needed, overwrite = TRUE)
Arguments
obj.from |
The source Seurat object from which elements in the |
obj.to |
The destination Seurat object to which elements in the |
elements.needed |
A vector of strings specifying the names of the elements in the |
overwrite |
Logical indicating whether to overwrite elements in |
Value
Returns the modified destination Seurat object (obj.to) with the specified elements
added to or updated in its @misc slot.
Examples
# Assuming `obj1` and `obj2` are Seurat objects and you wish to copy specific elements
# from obj1 to obj2, possibly overwriting existing elements in obj2
obj2 <- copyMiscElements(obj1, obj2, c("element1", "element2"), overwrite = TRUE)
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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