preparePhenoTable: Check that the table contains the mandatory columns and keep...
In vincela/VarExp: Computes phenotypic variance explained by a set of genetic and/or interaction effects
Description
Usage
Arguments
Value
Examples
Description
Check that the table contains the mandatory columns
and keep only rows (cohorts) with the specified ancestry pop.
If pop=="ALL", all rows are kept.
Usage
1
preparePhenoTable(df, ancest, pheno, expo)
Arguments
df
is the loaded data frame with individual cohorts information
ancest
is the ancestry analyzed
pheno
is the studied phenotype
expo
is the studied exposure
Value
The data frame with only rows corresponding to the studied population ancest
and colums corresponding to the studied phenotype pheno and exposure expo
Examples
1
2
data("COHORT", package="VarExp", envir = environment())
df = preparePhenoTable(COHORT, "EUR", "pheno1", "expo1")
vincela/VarExp documentation built on May 29, 2019, 12:42 p.m.
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Description Usage Arguments Value Examples
Description
Check that the table contains the mandatory columns
and keep only rows (cohorts) with the specified ancestry pop.
If pop=="ALL", all rows are kept.
Usage
1 | preparePhenoTable(df, ancest, pheno, expo)
|
Arguments
df |
is the loaded data frame with individual cohorts information |
ancest |
is the ancestry analyzed |
pheno |
is the studied phenotype |
expo |
is the studied exposure |
Value
The data frame with only rows corresponding to the studied population ancest
and colums corresponding to the studied phenotype pheno and exposure expo
Examples
1 2 | data("COHORT", package="VarExp", envir = environment())
df = preparePhenoTable(COHORT, "EUR", "pheno1", "expo1")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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