inst/scripts/provision_r.R
In vjcitn/BiocBBSpack: support for build system
ps = BiocPkgTools::biocPkgList(version="3.10")
library(BiocBBSpack)
pp = PackageSet(ps$Package)
provision_r = function(pkgset, ncpu=6) {
vec = pkgset@pkgnames
BiocManager::install(vec, Ncpus=ncpu)
}
provision_r(pp)
# with 6 CPU in jetstream M1.Xlarge this installed 3355
# packages in 2h20m
# however, valid() showed that this image had 290 old
# experiment data and some old CRAN packages, so
# install([out of date], Ncpus=8) was run
vjcitn/BiocBBSpack documentation built on Nov. 21, 2020, 1:18 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
ps = BiocPkgTools::biocPkgList(version="3.10")
library(BiocBBSpack)
pp = PackageSet(ps$Package)
provision_r = function(pkgset, ncpu=6) {
vec = pkgset@pkgnames
BiocManager::install(vec, Ncpus=ncpu)
}
provision_r(pp)
# with 6 CPU in jetstream M1.Xlarge this installed 3355
# packages in 2h20m
# however, valid() showed that this image had 290 old
# experiment data and some old CRAN packages, so
# install([out of date], Ncpus=8) was run
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.