Files in vjcitn/HumanTranscriptomeCompendium
Tools to work with a Compendium of 181000 human transcriptome sequencing studies
Copy_of_HTXoverview2.ipynb
DESCRIPTION
HTXoverview.ipynb
HTXoverview2.ipynb
NAMESPACE
R/ca43k.R
R/cache_works.R
R/data.R
R/htx_app.R
R/htx_load.R
R/htx_query.R
R/metazip_path.R
R/verifTools.R
README.md
SRAAPIpic.png
appshot.png
data/HumanTranscriptomeCompendium.colnames.rda
data/uniqueAcc_120518.rda
inst/ca43k/ca1009.zip
inst/ca43k/server.R
inst/ca43k/ui.R
inst/extras/getPMIDs.R
inst/extras/getatts.R
man/HumanTranscriptomeCompendium.colnames.Rd
man/addRD.Rd
man/ca43k.Rd
man/get_ds4841.Rd
man/htx_app.Rd
man/htx_load.Rd
man/htx_query_by_study_accession.Rd
man/htx_query_by_text.Rd
man/load_bigrnaFiles.Rd
man/load_experTable.Rd
man/load_studTable.Rd
man/path_doc4842.Rd
man/procExpToGene.Rd
man/tx2gene_gencode27.Rd
man/uniqueAcc_120518.Rd
metatree.png
sparseAnno.png
swaggerDemo.png
tests/testthat.R
tests/testthat/test_htc.R
vignettes/META/sample/BioSample
vignettes/META/sample/Insdc
vignettes/META/sample/LastMetaUpdate
vignettes/META/sample/LastUpdate
vignettes/META/sample/Published
vignettes/META/sample/Received
vignettes/META/sample/Status
vignettes/META/sample/accession
vignettes/META/sample/alias
vignettes/META/sample/attributes/BioSampleModel
vignettes/META/sample/attributes/collection_date
vignettes/META/sample/attributes/geo_loc_name
vignettes/META/sample/attributes/identified_by
vignettes/META/sample/attributes/isolation_source
vignettes/META/sample/attributes/sample_type
vignettes/META/sample/attributes/strain
vignettes/META/sample/center_name
vignettes/META/sample/identifiers
vignettes/META/sample/organism
vignettes/META/sample/sample_accession
vignettes/META/sample/taxon_id
vignettes/META/study/BioProject
vignettes/META/study/Insdc
vignettes/META/study/LastMetaUpdate
vignettes/META/study/LastUpdate
vignettes/META/study/Published
vignettes/META/study/Received
vignettes/META/study/Status
vignettes/META/study/abstract
vignettes/META/study/accession
vignettes/META/study/alias
vignettes/META/study/center_name
vignettes/META/study/identifiers
vignettes/META/study/study_accession
vignettes/META/study/study_type
vignettes/META/study/title
vignettes/SRAAPIpic.png
vignettes/appshot.png
vignettes/htxcomp.Rmd
vignettes/metatree.png
vignettes/metatree.txt
vignettes/sci.txt
vignettes/sparseAnno.png
vignettes/swaggerDemo.png
