Files in vjcitn/MultiAssayExperiment

Software for the integration of multi-omics experiments in Bioconductor

NEWS.md R/ExperimentList-class.R R/MultiAssayExperiment-class.R R/MultiAssayExperiment-helpers.R R/MultiAssayExperiment-methods.R R/MultiAssayExperiment-pkg.R R/MultiAssayExperiment-subset.R R/assay-methods.R R/data.R R/hasAssay.R R/listToMap.R R/mapToList.R R/prepMultiAssay.R R/subsetBy-methods.R R/upsetSamples.R README.md inst/extdata/exMatrix.R inst/scripts/ExperimentList-Ex.R inst/scripts/MultiAssayExperiment-Ex.R inst/scripts/MultiAssayExperiment-methods-Ex.R inst/scripts/listToMap-Ex.R inst/scripts/miniACC-Ex.R man/ExperimentList-class.Rd man/ExperimentList.Rd man/MatchedAssayExperiment-class.Rd man/MultiAssayExperiment-class.Rd man/MultiAssayExperiment-helpers.Rd man/MultiAssayExperiment-methods.Rd man/MultiAssayExperiment-package.Rd man/MultiAssayExperiment.Rd man/hasAssay.Rd man/mapToList.Rd man/miniACC.Rd man/prepMultiAssay.Rd man/subsetBy.Rd man/upsetSamples.Rd tests/testthat.R tests/testthat/test-ExperimentList-class.R tests/testthat/test-Formats.R tests/testthat/test-MultiAssayExperiment.R tests/testthat/test-colnameOrder.R tests/testthat/test-combine.R tests/testthat/test-constructors.R tests/testthat/test-drop.R tests/testthat/test-emptybuilders.R tests/testthat/test-map-manip.R tests/testthat/test-mergeReps.R tests/testthat/test-methods.R tests/testthat/test-row-col-order.R tests/testthat/test-rowcolnames.R tests/testthat/test-subset.R vignettes/MultiAssayExperiment.Rmd vignettes/MultiAssayExperiment_cheatsheet.pdf vignettes/QuickStartMultiAssay.Rmd vignettes/UsingHDF5Array.Rmd vignettes/extras/Fig1a.R vignettes/extras/Fig1b.R vignettes/extras/MAE-curatedMetagenomicData.Rmd