makeColData: generate a colData component corresponding to a mongodb

In vjcitn/TxRegInfra2: Metadata management for multiomic specification of transcriptional regulatory networks, version 2

Description

generate a colData component corresponding to a mongodb

Usage

makeColData(
  url = URL_txregLocal(),
  db = "txregnet",
  formatter = basicFormatter
)

Arguments

url	character(1) url for mongodb
db	character(1) database name
formatter	a function that takes in a character vector and returns a DataFrame with number of rows equal to the length of input

Value

a DataFrame instance

Examples

if (verifyHasMongoCmd()) makeColData()

vjcitn/TxRegInfra2 documentation built on Jan. 1, 2021, 12:41 p.m.