has_mut_in: check all columns for presence of symbol in a SE with ragged...

In vjcitn/YESCDS: Cancer data science activities for CZI YES for CURE collaboration

check all columns for presence of symbol in a SE with ragged mutation matrix as assay

Description

check all columns for presence of symbol in a SE with ragged mutation matrix as assay

Usage

has_mut_in(sym, se)

Arguments

sym	character(1) HUGO symbol
se	a SummarizedExperiment instance with ragged mutation matrix as assay

Value

a vector of logicals, one for each column; uses '

Examples

data(brcamutSE)
table(has_mut_in("TTN", brcamutSE))

vjcitn/YESCDS documentation built on April 16, 2024, 1:03 p.m.