In vjcitn/biocwk312: Workshop intro for Bioconductor 3.12.
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>"
)
Transcriptome analysis via bulk RNA-seq
What's already done: the recount3 compendium
Your own sequencing: tximport, tximeta to DESeq2
Single-cell RNA-seq
The CONQUER compendium
Your own sequencing: alevin ...
Gene set methods in brief: working with MSigDb, TFtools
vjcitn/biocwk312 documentation built on Jan. 1, 2021, 12:41 p.m.
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knitr::opts_chunk$set( collapse = TRUE, comment = "#>" )
Transcriptome analysis via bulk RNA-seq
What's already done: the recount3 compendium
Your own sequencing: tximport, tximeta to DESeq2
Single-cell RNA-seq
The CONQUER compendium
Your own sequencing: alevin ...
Gene set methods in brief: working with MSigDb, TFtools
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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