Man pages for vjcitn/htxcomp
Compendium of human transcriptome sequences
| addRD | add gene-level rowData derived from transcript level... |
| bigrnaFiles | bigrnaFiles: vector of files in bigrna |
| experTable | experiment-level metadata |
| htxApp | explore SRA metadata |
| htxcomp.colnames | character vector of available samples in HDF cloud assay... |
| htxQuery | retrieve 'restfulSE' SummarizedExperiment instance for... |
| loadHtxcomp | load a SummarizedExperiment shell for the htx compendium |
| procExpToGene | acquire a single sample from bigRNA compendium specified by... |
| sampleAtts | retrieve a normalized data.frame of sample attributes for... |
| studTable | study-level metadata |
| tx2gene_gencode27 | generate a data.frame mapping gencode 27 ensembl transcript... |
| uniqueAcc_120518 | experiment accessions available in compendium as of may 12... |
