loadHtxcomp: load a SummarizedExperiment shell for the htx compendium
In vjcitn/htxcomp: Compendium of human transcriptome sequences
Description
Usage
Arguments
Examples
Description
load a SummarizedExperiment shell for the htx compendium
Usage
1
2
loadHtxcomp(remotePath = "https://s3.amazonaws.com/bcfound-bigrna/htxcompSE.rds",
cache = BiocFileCache(), genesOnly = TRUE)
Arguments
remotePath
path to an RDS representation of the DelayedArray-based SummarizedExperiment
cache
a BiocFileCache instance, defaulting to value of BiocFileCache()
genesOnly
logical(1) if TRUE return reference to
SummarizedExperiment with gene-level quantifications; in this
case the remotePath value is
set to 'https://s3.amazonaws.com/bcfound-bigrna/rangedHtxGeneSE.rds'.
Examples
1
vjcitn/htxcomp documentation built on May 17, 2019, 8:16 p.m.
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Description Usage Arguments Examples
Description
load a SummarizedExperiment shell for the htx compendium
Usage
1 2 | loadHtxcomp(remotePath = "https://s3.amazonaws.com/bcfound-bigrna/htxcompSE.rds",
cache = BiocFileCache(), genesOnly = TRUE)
|
Arguments
remotePath |
path to an RDS representation of the DelayedArray-based SummarizedExperiment |
cache |
a BiocFileCache instance, defaulting to value of BiocFileCache() |
genesOnly |
logical(1) if TRUE return reference to SummarizedExperiment with gene-level quantifications; in this case the remotePath value is set to 'https://s3.amazonaws.com/bcfound-bigrna/rangedHtxGeneSE.rds'. |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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