Files in vjcitn/oc2bioc
simple interfaces from OpenCRAVAT to Bioconductor
DESCRIPTION
NAME.prestash
NAMESPACE
R/S4.R
R/basilisk.R
R/build_req.R
R/data.R
R/invoke.R
R/make_postable.R
R/pullTF.R
R/query.R
R/use_sqlite.R
R/utils.R
README.md
data/SO_map.rda
data/SO_onto.rda
data/ch19to38.rda
data/crx_demo.rda
data/gr38.rda
data/nonco_var.rda
data/var_in_tx.rda
filt.png
inst/anvil/DESCRIPTION.md
inst/anvil/Dockerfile
man/OpenCRAVATModule-class.Rd
man/OpenCRAVATModuleSet-class.Rd
man/SO_map.Rd
man/SO_onto.Rd
man/as.data.frame-OpenCRAVATModuleSet-method.Rd
man/barplot_gene_ontology.Rd
man/barplot_sequence_ontology.Rd
man/browse_oc_result.Rd
man/ch19to38.Rd
man/connect_local_annotator.Rd
man/crx_demo.Rd
man/get_SO_freq.Rd
man/get_oc_job_status.Rd
man/get_oc_sqlite_content.Rd
man/get_oc_tab.Rd
man/gr38.Rd
man/header_tx.Rd
man/import_local_crx.Rd
man/install_oc_module.Rd
man/key_modules.Rd
man/list_local_annotators.Rd
man/local_oc_job_resources.Rd
man/local_oc_jobids.Rd
man/local_oc_path.Rd
man/local_oc_sqlite_con.Rd
man/local_oc_variant_tbl.Rd
man/make_oc_POSTable.Rd
man/nonco_var.Rd
man/ocapp.Rd
man/path_to_oc_executable.Rd
man/populate_module_set.Rd
man/pullTF.Rd
man/queryOC.Rd
man/run_oc_req.Rd
man/show-OpenCRAVATModule-method.Rd
man/show-OpenCRAVATModuleSet-method.Rd
man/var_in_tx.Rd
oldReadme.md
vignettes/filt.png
vignettes/oc2bioc.Rmd
vignettes/oc2bioc.bib
