run_meta_county: county within state metaanalysis of incidence velocity

In vjcitn/sars2app: COVID-19 data resources and analysis tools cut down for an interactive app

Description

county within state metaanalysis of incidence velocity

Usage

run_meta_county(nytc, state.in = "Massachusetts", verbose = TRUE, ...)

Arguments

nytc	nytimes_county_data() output
state.in	character(1)
verbose	logical(1) will print '.' after each county's optimal AR/MA orders found
...	passed to Arima_by_county

Note

The search for optimal AR/MA orders may throw warnings.

Examples

nytc = nytimes_county_data()
m1 = run_meta_county(nytc)
names(m1$drifts) = gsub(".drift", "", names(m1$drifts))
rmeta::meta.summaries(m1$drifts, m1$se.drifts)
o = order(m1$drifts)
rmeta::metaplot(m1$drifts[o], m1$se.drifts[o], labels=names(m1$drifts)[o], cex=.7, 
  xlab="Infection velocity (CHANGE in number of confirmed cases/day)", ylab="County")

vjcitn/sars2app documentation built on Jan. 3, 2022, 12:19 a.m.