R/data.R

In vjcitn/tnt4dn8: TnT applications with GWAS in dn8 format

#' small dn8-formatted GTEx excerpt, chr20
#' @docType data
#' @format data.frame
"gtex_b38_lung_chr20_exc"

#' a data frame with gene addresses etc. for hg19 coordinates
#' @docType data
#' @format data.frame
"genes_ensv75"

#' a data frame with gene addresses etc. for hg38 coordinates
#' @docType data
#' @format data.frame
"genes_ensv79"

#' a chain lifting from hg38 to hg19
#' @docType data
#' @format rtracklayer Chain instance
"hg38ToHg19"

#' TnT genetrack from Ensembl v75
#' @docType data
#' @format TnT genetrack
"genetrack_hg19"

#' small dn8-similar GWAS catalog excerpt, chr20
#' @docType data
#' @format data.frame
"limgwcat_b38"