phylomap | Phylogenetic Stochastic Mapping |
simulate_2_state_tree | Tip state simulation for a 2 state model |
simulate_4_state_tree | Tip state simulation for a 4 state model |
SPARSEsumstatMCMC | Phylogenetic Stochastic Mapping without Matrix Exponentiation... |
sumstatEXP | Phylogenetic Stochastic Mapping with Matrix Exponentiation |
sumstatMCMC | Phylogenetic Stochastic Mapping without Matrix Exponentiation |
sumstatMCMCbf | Phylogenetic Stochastic Mapping for a 2x2 unknown rate matrix... |
sumstatMCMC_bigtree | Phylogenetic Stochastic Mapping without Matrix Exponentiation |
sumstatMCMCks | Phylogenetic Stochastic Mapping for a 2 state trait with an... |
sumstatMCMCksmt | Phylogenetic Stochastic Mapping for a 2 state trait with an... |
sumstatMCMCmt | Phylogenetic Stochastic Mapping for a 2x2 unknown rate matrix... |
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