API for vnminin/phylomap
Phylogenetic Stochastic Mapping

Global functions
SPARSEmaketreelistMCMC Source code
SPARSEsumstatMCMC Man page Source code
add_labels_DIC_squamate_plot Source code
changemytipstates Source code
combine_DIC_results Source code
correct_AIC_decision_counter Source code
correct_DIC_decision_counter Source code
countgains Source code
countlosses Source code
crazystart1 Source code
create_AIC_results Source code
create_dataframe_for_plotting Source code
divtophy Source code
divtophymap Source code
findroot Source code
get_corHMM_AIC_result Source code
make2sQ Source code
make2stateDIC Source code
make2stateDICbig Source code
make2stateDICm Source code
make4stateDIC Source code
make4stateDICbig Source code
make4stateDICm Source code
make_12_chains Source code
make_squamate_tree Source code
makebpm Source code
makecounts Source code
makemapnames Source code
makemappededge Source code
makenodelist Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
maketreelistEXP Source code
maketreelistMCMC Source code
maketreelistMCMC2sDICt Source code
maketreelistMCMC_bigtree Source code
maketreelistMCMCbf Source code
maketreelistMCMCks Source code
maketreelistMCMCksDICt Source code
maketreelistMCMCksmt Source code
maketreelistMCMCmt Source code
multhist Source code
myreorder Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
nodestatesmake Source code
onemapbranch Source code
phylomap Man page
pruningwiseedgeorder Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
sample2statehistory Source code
samplethebranch Source code
simulate_2_state_tree Man page Source code
simulate_4_state_tree Man page Source code
simulate_estimate Source code
squamate_DIC_plot Source code
statesmake Source code
sumstatEXP Man page Source code
sumstatMCMC Man page Source code
sumstatMCMC2sDICt Source code
sumstatMCMC_bigtree Man page Source code
sumstatMCMCbf Man page Source code
sumstatMCMCks Man page Source code
sumstatMCMCksDICt Source code
sumstatMCMCksmt Man page Source code
sumstatMCMCmt Man page Source code
vnminin/phylomap documentation built on March 21, 2018, 6:56 a.m.