run_seqgen_HKY: Simulate sequences using Seq-Gen
In wadedismukes/treeduckenTools: treeduckenTools
View source: R/seq-gen_wrapper.R
Description
This function provides a more friendly interface around the seqgen wrapper
used in phyclust. Parameters are provided as numeric values and sent to
seqgen and the alignment is returned as a matrix.
Usage
1
2
run_seqgen_HKY(tree, equilibrium_probabilities, tstv_ratio, seq_length,
num_replicates, tree_scale = 1, branch_scale = 1, seed = NULL)
wadedismukes/treeduckenTools documentation built on Aug. 14, 2019, 2:14 a.m.
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View source: R/seq-gen_wrapper.R
Description
This function provides a more friendly interface around the seqgen wrapper used in phyclust. Parameters are provided as numeric values and sent to seqgen and the alignment is returned as a matrix.
Usage
1 2 | run_seqgen_HKY(tree, equilibrium_probabilities, tstv_ratio, seq_length,
num_replicates, tree_scale = 1, branch_scale = 1, seed = NULL)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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