waldronlab/bugsigdbr: R-side access to published microbial signatures from BugSigDB
The bugsigdbr package implements convenient access to bugsigdb.org from within R/Bioconductor. The goal of the package is to facilitate import of BugSigDB data into R/Bioconductor, provide utilities for extracting microbe signatures, and enable export of the extracted signatures to plain text files in standard file formats such as GMT.
Getting started
Browse package contents
Package details |
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|---|---|
| Bioconductor views | DataImport GeneSetEnrichment Metagenomics Microbiome |
| Maintainer | |
| License | GPL-3 |
| Version | 1.9.4 |
| URL | https://github.com/waldronlab/bugsigdbr |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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