liverDataVP: Example 4C-seq data set of fetal liver data, with added VP
In walter-ca/Scale4C: Scale4C: an R/Bioconductor package for scale-space transformation of 4C-seq data
Description
Usage
Format
Value
Source
Examples
Description
This data set contains an instance of a Scale4C object.
The 4C-seq data was taken from Stadhouders et al's fetal liver data set.
It contains a manually added viewpoint peak and a peak with a manual
coordinate correction.
Usage
1
data("liverDataVP")
Format
Formal class 'Scale4C'
Value
A pre-computed instance of a Scale4C object with fingerprint
map and singularities
Source
Shortened version of Stadhouders et al's fetal liver data:
Stadhouders, R., Thongjuea, S., et al. (2012): Dynamic long-range chromatin
interactions control Myb proto-oncogene transcription during erythroid
development. EMBO, 31, 986-999.
Examples
1
2
data("liverDataVP")
liverDataVP
walter-ca/Scale4C documentation built on May 5, 2019, 9:03 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Value Source Examples
Description
This data set contains an instance of a Scale4C object.
The 4C-seq data was taken from Stadhouders et al's fetal liver data set. It contains a manually added viewpoint peak and a peak with a manual coordinate correction.
Usage
1 | data("liverDataVP")
|
Format
Formal class 'Scale4C'
Value
A pre-computed instance of a Scale4C object with fingerprint
map and singularities
Source
Shortened version of Stadhouders et al's fetal liver data:
Stadhouders, R., Thongjuea, S., et al. (2012): Dynamic long-range chromatin interactions control Myb proto-oncogene transcription during erythroid development. EMBO, 31, 986-999.
Examples
1 2 | data("liverDataVP")
liverDataVP
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.