Man pages for wdelva/RSimpactHelp
Pre- and Post-simulation helper functions for RSimpact Cyan

agedif.medianAge difference median.
agedistr.creatorCreate an age distribution for the population at the start of...
age.group.time.windowSubset the datalist ptable to include only people who existed...
agemix.df.makerCreate dataframe for relationship analyses.
agemixpatdatAge-mixing pattern model data.
alive.infectedSubset people alive at a point in time and adds their HIV...
ART.coverage.calculatorCalculate overall HIV prevalence and ART coverage aggregated...
art.person.yearsA function that returns the total number of person-years on...
ART.retentionA function that returns the percentage of clients who are on...
cd4.atARTinitA function that returns the total number of people who...
cd4.vl.atARTinitA function that returns the total number of people between...
client.facilityA function that determines the facility the client attended...
concurr.pointprev.calculatorCalculate concurrent point prevalence, overall and...
datalistSimpact run datalist data.
degree.df.fracFraction of women within specified age group with more than...
degree.df.makerDegree distribution of persons in recent sexual...
degree.distr.fitterFitting parametric distributions to the degree data
degree.hist.makerPlot the histogram of a degree distribution.
err.functionWe expect this to grow and the returned summary statistics to...
hiv.infected.groupCalculate the number of HIV infections that occured between...
hiv.negative.lifeyearsA function that returns the total number of HIV-negative life...
incidence.calculatorCalculate HIV incidence, overall and stratified.
input.params.creatorCreate a default parameter configuration list.
intervention.introducedWe need to decide if we need to include all the intervention...
life.years.livedA function that returns the total number of life-years lived...
pattern.modellerModel age-mixing pattern.
pattern.plotterPlot age-mixing pattern.
persreldfRelationship episodes from Simpact Simulation.
pop.growth.calculatorCalculate population growth rate.
prevalence.calculatorCalculate HIV prevalence, overall and stratified.
prevalence.plotterPlot the overall HIV prevalence for the duration of the...
readthedataRead the Simpact output files.
recruit.study.clientsA function that recruits the MaxART clients
select.summary.paramsSelect the summary statistics that you want from the...
simpact.config.inputsSimpact config input parameters to be estimated.
simpact.config.inputs.add.sampleResampling of Simpact config input parameters to be...
simpact.config.inputs.par.selectSimpact config input parameters to be estimated.
simpact.params.boundariesThese are the preset boundaries for most of the parameters...
timespentsingle.calculatorCalculate time spent being single.
transm.network.builderBuild a list with HIV transmission network data.
varied.simpact.paramsSelect the parameters that need to be calibrated to meet the...
vl.atARTinitA function that returns the total number of people between...
vl.suppressedA function that returns the percentage of clients who are...
wdelva/RSimpactHelp documentation built on Dec. 17, 2017, 6:28 p.m.