process_biotime_dataset: Process an individual BioTime dataset

In weecology/MATSS: Macroecological Analyses of Time Series Structure

Description

Filter and modify the BioTime data. Generate the abundance, covariate, and metadata tables and return the combined object.

Usage

process_biotime_dataset(
  biotime_data_tables,
  dataset_id = 10,
  save_to_file = FALSE,
  storage_path = file.path(get_default_data_path(), "biotime-prepped"),
  citation_text = NULL
)

Arguments

biotime_data_tables	full BioTime data tables
dataset_id	the study_id
save_to_file	whether to save the processed dataset to a file
storage_path	folder in which to put processed dataset
citation_text	text of citation for the database

Value

the processed BioTime dataset

weecology/MATSS documentation built on May 15, 2020, 7:03 p.m.