simBlockSet: Simulated genotype data
In weinstockj/gwassim: Simulate GWAS data
Description
Usage
Arguments
Details
Value
Description
generates a matrix of several LD blocks combined together
Usage
1
simBlockSet(config)
Arguments
config
A list cretaed by setConfiguration
Details
The LD blocks are generated separately and are combined
in a greedy fashion. The process is generally as follows:
1) generate block_1 using the simBlock function
2) generate block_2
3) compare block_1 to block_2 using canonical correlation.
4) Accept block_2 as the next block in the sequence of LD blocks
if the between block canonical correlation exceeds the user
defined BLOCK_COR parameter.
Value
a matrix of several adjacent LD blocks of type genosim
weinstockj/gwassim documentation built on May 4, 2019, 4:18 a.m.
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Description Usage Arguments Details Value
Description
generates a matrix of several LD blocks combined together
Usage
1 | simBlockSet(config)
|
Arguments
config |
A list cretaed by setConfiguration |
Details
The LD blocks are generated separately and are combined in a greedy fashion. The process is generally as follows: 1) generate block_1 using the simBlock function 2) generate block_2 3) compare block_1 to block_2 using canonical correlation. 4) Accept block_2 as the next block in the sequence of LD blocks if the between block canonical correlation exceeds the user defined BLOCK_COR parameter.
Value
a matrix of several adjacent LD blocks of type genosim
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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