In whtns/seuratTools: Tools for Managing Seurat Objects

In this article we will introduce the pipeline being used for processing the data. Through this article we will be introducing different .

knitr::opts_chunk$set(
    collapse = TRUE,
    comment = "#>",
    # dev.args = list(png = list(type = "cairo")),
    dpi = 900,
    out.width = "100%",
    message = FALSE,
    warning = FALSE
)

library(xfun)

format_table <- function(mydf) {
    mydf %>%
        kableExtra::kbl() %>%
        kable_paper() %>%
        scroll_box(width = "700px", height = "200px")
}

First step is to load seuratTools and all other packages required

library(seuratTools)
library(Seurat)
library(tidyverse)
library(ggraph)
library(patchwork)

whtns/seuratTools documentation built on June 28, 2024, 8:30 p.m.