plot_transcript_composition: Plot Transcript Composition

In whtns/seuratTools: Tools for Managing Seurat Objects

Plot Transcript Composition

Description

plot the proportion of reads of a given gene map to each transcript

Usage

plot_transcript_composition(
  seu,
  gene_symbol,
  group.by = "batch",
  standardize = FALSE,
  drop_zero = FALSE
)

Arguments

seu	A seurat object
gene_symbol	Gene symbol of gene of intrest
group.by	Name of one or more metadata columns to annotate columns by (for example, orig.ident)
drop_zero	Drop zero values

Examples

plot_transcript_composition(human_gene_transcript_seu, "RXRG", group.by = "gene_snn_res.0.6")

whtns/seuratTools documentation built on April 9, 2024, midnight