plot_violin: Plot Violin plot
In whtns/seuratTools: Tools for Managing Seurat Objects
plot_violin R Documentation
Plot Violin plot
Description
Plots a Violin plot of a single data (gene expression, metrics, etc.)
grouped by a metadata variable
Usage
plot_violin(
seu,
plot_var = "batch",
plot_vals = NULL,
features = "RXRG",
assay = "gene",
...
)
Arguments
seu
A Seurat object
plot_var
Variable to group (color) cells by
features
Features to plot
assay
Name of assay to use, defaults to the active assay
...
Examples
plot_violin(human_gene_transcript_seu, plot_var = "batch", features = c("NRL", "GNAT2"))
whtns/seuratTools documentation built on April 9, 2024, midnight
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| plot_violin | R Documentation |
Plot Violin plot
Description
Plots a Violin plot of a single data (gene expression, metrics, etc.) grouped by a metadata variable
Usage
plot_violin(
seu,
plot_var = "batch",
plot_vals = NULL,
features = "RXRG",
assay = "gene",
...
)
Arguments
seu |
A Seurat object |
plot_var |
Variable to group (color) cells by |
features |
Features to plot |
assay |
Name of assay to use, defaults to the active assay |
... |
Examples
plot_violin(human_gene_transcript_seu, plot_var = "batch", features = c("NRL", "GNAT2"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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