Man pages for willpearse/willeerd
Will's Eco-Evo R coDe
| bind.ultrametric.by.replacement | 'bind.ultrametric.by.replacement' Bind one phylogeny into... |
| bonnie.f | 'bonnie.f' Calculate nested F-ratios - "correctly" (for... |
| cartoon.plot | 'cartoon.plot' Plot phylogenies with cartoon-ised polytomies |
| congeneric.merge | 'congeneric.merge' Bind missing species into a phylogeny... |
| drip.node.labels | 'drip.node.labels' 'Drip' node.labels through a phylogeny |
| factorise.tree | 'factorise.tree' Thin species on a large phylogeny, making it... |
| fiber.plot | 'fiber.plot' (fibrously) plots a phylogeny |
| find.unique.branch.length | 'find.unique.branch.length' Find the terminal edge length... |
| label.tree.nodes | 'label.tree.nodes' Label nodes of phylogeny according to tip... |
| label.tree.tips | 'label.tree.tips' Label tips of phylogeny according to node... |
| lean | 'lean' Local Environmental Adaptation Null model |
| make.clean.taxon.lookup | 'make.clean.taxon.lookup' Take input species names, quickly... |
| make.composite.with.polytomies | 'make.composite.with.polytomies' Bind groups of species into... |
| make.polytomy | 'make.polytomy' Make a polytomy (optionally with edge... |
| plot.transition.calc | 'transition.calc' regression of aged transitions among... |
| randomly.resolve | 'randomly.resolve' Moves species around randomly within a... |
| read.ncdc | Load US NCDC data (climate, etc.) |
| ref.phylosor | 'ref.phylosor' Calculate phylosor using a single assembalge... |
| ringlabels | 'ringlabels' Label particular tip(s) with text around the... |
| tipring | 'tipring' Add tiplabels to a circular phylogeny |
| trait.space | 'trait.space' (maybe) make a trait space of species... |
| transition.calc | 'transition.calc' regression of aged transitions among... |
| willeerd.nodelabels | 'willeerd.nodelabels' Plot tip labels with radial spacing |
| willeerd-package | Things that Will has written in R ~~ willeerd ~~ |
| willeerd.plot.phylo | 'willeerd.plot.phylo' Plot a rooted phylogeny (with more... |
| willeerd.tiplabels | 'willeerd.tiplabels' Plot tip labels with radial spacing |
