psv2n: calculate score by PS-V2N methods
In windforclouds/PSV2N: This is a shortest path-based algorithm named PS-V2N.
Description
Usage
Arguments
Value
Author(s)
Examples
Description
1) ready for one dataframe(such as vertex_sample, first
column is gene name, and the second colname is the type
identification code 0, 1, and 2 (0 means groupA, 1 maens groupB, 2 means share genes);
2) Get your edge dataframe ready(such as edge_sample)
Usage
1
psv2n(vertex, edge)
Arguments
vertex
the vertex data of your network,such as vertex_sample,
see also vertex_input
edge
the edge data of your network,such as edge_sample
Value
the PS-V2N score of your group A
Author(s)
Ji Yang
Examples
1
windforclouds/PSV2N documentation built on Dec. 23, 2021, 5:15 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
1) ready for one dataframe(such as vertex_sample, first column is gene name, and the second colname is the type identification code 0, 1, and 2 (0 means groupA, 1 maens groupB, 2 means share genes); 2) Get your edge dataframe ready(such as edge_sample)
Usage
1 | psv2n(vertex, edge)
|
Arguments
vertex |
the vertex data of your network,such as vertex_sample,
see also |
edge |
the edge data of your network,such as edge_sample |
Value
the PS-V2N score of your group A
Author(s)
Ji Yang
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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