SampleQC: SampleQC: robust multivariate, multi-celltype, multi-sample...
In wmacnair/SampleQC: Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
SampleQC R Documentation
SampleQC: robust multivariate, multi-celltype, multi-sample quality control for single cell RNA-seq
Description
SampleQC is an R package for robust multivariate, multi-
celltype, multi-sample quality control for single cell RNA-seq. Unimodal
approaches to QC, such as scater, may preferentially remove healthy cells
from celltypes with extreme QC statistics, introducing bias. SampleQC
removes this bias by fitting a Gaussian mixture model. The fit is done
across multiple celltypes simultaneously, and using robust estimators
allows it to find the distributions in the (expected) presence of outliers.
wmacnair/SampleQC documentation built on Nov. 18, 2022, 5 p.m.
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| SampleQC | R Documentation |
SampleQC: robust multivariate, multi-celltype, multi-sample quality control for single cell RNA-seq
Description
SampleQC is an R package for robust multivariate, multi-
celltype, multi-sample quality control for single cell RNA-seq. Unimodal
approaches to QC, such as scater, may preferentially remove healthy cells
from celltypes with extreme QC statistics, introducing bias. SampleQC
removes this bias by fitting a Gaussian mixture model. The fit is done
across multiple celltypes simultaneously, and using robust estimators
allows it to find the distributions in the (expected) presence of outliers.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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