multigroupVolcano: plot volcano given multiple conditions
In wolski/quantable: Streamline Descriptive Analysis of Quantitative Data Matrices

plot volcano given multiple conditions

multigroupVolcano(misspX, effect = "fc", p.value = "p.adjust",
  condition = "condition", colour = "colour", xintercept = c(-2, 2),
  pvalue = 0.05, label = NULL, size = 1, segment.size = 0.3,
  segment.alpha = 0.3, ablines = data.frame(fc = c(0, 0), p = c(0.01,
  0.05), Area = c("p=0.01", "p=0.05")), scales = "fixed",
  maxNrOfSignificantText = 20)

`misspX`	data in long format
`effect`	column containing effect sizes
`p.value`	column containing p-values, q.values etc
`condition`	column with condition
`colour`	colouring of points
`xintercept`	fc thresholds
`pvalue`	pvalue threshold
`label`	column containing labels
`size`	controls size of text
`segment.size`	controls size of lines
`segment.alpha`	controls visibility of lines
`ablines`	adds ablines horizontal and vertical
`scales`	parameter to ggplot2::facet_wrap

library(ggplot2)
library(tidyverse)
library(ggrepel)
data(multigroupFCDATA)
colnames(multigroupFCDATA)
multigroupVolcano(multigroupFCDATA,effect="logFC",p.value="adj.P.Val",condition="Condition",colour="colour",label="Name" )