Files in wrightaprilm/treeStartR
Generate Starting Trees For Combined Molecular, Morphological and Stratigraphic Data
.Rbuildignore
.github/CONTRIBUTING.md
.github/issue_template.txt
.github/pull_request_template.txt
.gitignore
.travis.yml
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
NAMESPACE
R/absent_tippR.R
R/data.R
R/dataframe_loadR.R
R/echo_rb.R
R/echo_subtree.R
R/genera_strippR.R
R/get_found.R
R/get_lost.R
R/make_absent_df.R
R/present_tippr.R
R/rand_absent_tippr.R
R/taxon_testr.R
R/test-fileFormat.R
R/text_placR.R
R/tree_df.R
R/treestartr.R
README.Rmd
README.md
bibliography.bib
codecov.yml
data/bears.RData
docs/CODE_OF_CONDUCT.html
docs/CONTRIBUTING.html
docs/LICENSE-text.html
docs/articles/index.html
docs/articles/vignette.html
docs/articles/vignette_files/figure-html/unnamed-chunk-5-1.png
docs/articles/vignette_files/figure-html/unnamed-chunk-6-1.png
docs/articles/vignette_files/figure-html/unnamed-chunk-8-1.png
docs/articles/vignette_files/figure-html/unnamed-chunk-9-1.png
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/images/flowchart/flowchart.001.png
docs/images/logo1.png
docs/index.html
docs/index_files/figure-html/unnamed-chunk-10-1.png
docs/index_files/figure-html/unnamed-chunk-5-1.png
docs/index_files/figure-html/unnamed-chunk-6-1.png
docs/index_files/figure-html/unnamed-chunk-8-1.png
docs/index_files/figure-html/unnamed-chunk-9-1.png
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/absent_tippr-1.png
docs/reference/absent_tippr.html
docs/reference/ants.html
docs/reference/bears.html
docs/reference/dataf_parsr.html
docs/reference/echo_rb.html
docs/reference/echo_subtree.html
docs/reference/fileformat.html
docs/reference/genera_strippr.html
docs/reference/get_found.html
docs/reference/get_lost.html
docs/reference/index.html
docs/reference/make_absentdf.html
docs/reference/make_treedf.html
docs/reference/present_tippr.html
docs/reference/rand_absent_tippr.html
docs/reference/taxon_testr.html
docs/reference/text_placr.html
docs/reference/treestartr.html
images/flowchart/flowchart.001.png
images/logo.png
images/logo1.png
images/small.txt.svg
inst/extdata/bears_cytb.nex
inst/extdata/bears_morphology.nex
inst/extdata/bears_taxa.tsv
inst/extdata/mrca_df.tsv
inst/extdata/simple.tre
man/absent_tippR.Rd
man/bears.Rd
man/dataf_parsR.Rd
man/echo_rb.Rd
man/echo_subtree.Rd
man/fileFormat.Rd
man/genera_strippR.Rd
man/get_found.Rd
man/get_lost.Rd
man/make_absentdf.Rd
man/make_treedf.Rd
man/present_tippR.Rd
man/rand_absent_tippR.Rd
man/taxon_testr.Rd
man/text_placR.Rd
man/treestartr.Rd
paper/Draft.pdf
paper/paper.tex
paper/preamble.tex
paper/sysbio.bst
paper/tem.tex
refs.bib
tests/.DS_Store
tests/testthat.R
tests/testthat/.DS_Store
tests/testthat/test-echo-rb.R
tests/testthat/test-echo-sub.R
tests/testthat/test-fileFormat.R
tests/testthat/test-present_tippr.R
tests/testthat/test-random-addition.R
tests/testthat/test-taxlist.R
tests/testthat/test-taxon_parser.R
tests/testthat/test-text_placr.R
tests/testthat/testdata/ExampleTaxList.Rda
tests/testthat/testdata/ExampleTree.Rda
tests/testthat/testdata/bears_broken.tsv
tests/testthat/testdata/bears_cytb.nex
tests/testthat/testdata/bears_morphology.nex
tests/testthat/testdata/bears_taxa.tsv
tests/testthat/testdata/mrca_df.tsv
tests/testthat/testdata/simple.tre
treeStartR.Rproj.Rcheck/00check.log
