simuN5: Simulated study with random outliers

In wtaoyang/ABSSeq: ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences

Description

Simulated study with random outliers, include five samples for two groups. It contains counts table, groups and defined differential expression genes.

Usage

data(simuN5)

Format

The format is: List of 3

$ counts: integer, reads count matrix

$ groups: two groups

$ DEs : differential expression genes

Details

Multiple each gene with a value from 5-10 by chance at pvalue of 0.05.

Source

http://bcf.isb-sib.ch/data/compcodeR/

References

Soneson C, Delorenzi M: A comparison of methods for differential expression analysis of RNA-seq data. BMC Bioinformatics 2013, 14(1):91.

Examples

data(simuN5)

wtaoyang/ABSSeq documentation built on May 27, 2019, 8:46 a.m.