continuousAceByPIC: Predict global ancestral state under the BM model
In wu-lab-uva/RasperGade: Reconstructing Ancestral State under Pulsed Evolution in R by Gaussian Decomposition
View source: R/RasperGade_global_ancestral_state.R
continuousAceByPIC R Documentation
Predict global ancestral state under the BM model
Description
Predict global ancestral state under the BM model given a phylogeny, known tip states, and the rate of BM
Usage
continuousAceByPIC(x, phy, rate = 1)
Arguments
x
named vector of tip trait values; names should match the tip labels with no missing values
phy
phylo-class object from ape package
rate
the rate of BM
Value
a data frame listing the means and variances of the ancestral states
wu-lab-uva/RasperGade documentation built on June 24, 2022, 2:47 p.m.
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View source: R/RasperGade_global_ancestral_state.R
| continuousAceByPIC | R Documentation |
Predict global ancestral state under the BM model
Description
Predict global ancestral state under the BM model given a phylogeny, known tip states, and the rate of BM
Usage
continuousAceByPIC(x, phy, rate = 1)
Arguments
x |
named vector of tip trait values; names should match the tip labels with no missing values |
phy |
phylo-class object from |
rate |
the rate of BM |
Value
a data frame listing the means and variances of the ancestral states
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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