Perform.ASCA: Perform ASCA
In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data
View source: R/multifac_asca_heatmap2.R
Perform.ASCA R Documentation
Perform ASCA
Description
The ASCA algorithm was adapted from the ASCA-genes method
(analysis of variance (ANOVA) simultaneous component analysis)
by Maria Jose Nueda (mj.nueda@ua.es) and Ana Conesa (aconesa@ivia.es)
Usage
Perform.ASCA(mSetObj = NA, a = 1, b = 2, x = 2, res = 2)
Arguments
mSetObj
Input the name of the created mSetObj (see InitDataObjects)
a
specify the number of components for facA
b
specify the number of components for facB
x
specify the number of components for interaction AB
res
specify the number of model residuals
type is string, indicating the type of analysis
"abc" separately
"aab" facA joins with AB
"bab" facB joins with AB
Author(s)
Jeff Xia jeff.xia@mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
xia-lab/MetaboAnalystR documentation built on Dec. 23, 2024, 3:44 p.m.
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View source: R/multifac_asca_heatmap2.R
| Perform.ASCA | R Documentation |
Perform ASCA
Description
The ASCA algorithm was adapted from the ASCA-genes method (analysis of variance (ANOVA) simultaneous component analysis) by Maria Jose Nueda (mj.nueda@ua.es) and Ana Conesa (aconesa@ivia.es)
Usage
Perform.ASCA(mSetObj = NA, a = 1, b = 2, x = 2, res = 2)
Arguments
mSetObj |
Input the name of the created mSetObj (see InitDataObjects) |
a |
specify the number of components for facA |
b |
specify the number of components for facB |
x |
specify the number of components for interaction AB |
res |
specify the number of model residuals type is string, indicating the type of analysis "abc" separately "aab" facA joins with AB "bab" facB joins with AB |
Author(s)
Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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