Plot.sampletrend: Sample Trend Scatter

View source: R/batch_effect_utils.R

Plot.sampletrendR Documentation

Sample Trend Scatter

Description

Scatter sample trend comparison between all sample of different batches

Usage

Plot.sampletrend(
  mSetObj,
  imgName,
  format = "png",
  dpi = 72,
  width = NA,
  method
)

Arguments

mSetObj

Input name of the created mSet Object

imgName

Input a name for the plot

format

Select the image format, "png", or "pdf".

dpi

Input the dpi. If the image format is "pdf", users need not define the dpi. For "png" images, the default dpi is 72. It is suggested that for high-resolution images, select a dpi of 600.

width

Input the width, there are 2 default widths, the first, width = NULL, is 10.5. The second default is width = 0, where the width is 7.2. Otherwise users can input their own width.

method

method of correction

Author(s)

Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca, Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)


xia-lab/MetaboAnalystR documentation built on Dec. 23, 2024, 3:44 p.m.