PlotInmexGraph: Plot an igraph object and return the node information...

In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data

Plot an igraph object and return the node information (position and labels)

Description

Plot an igraph object and return the node information (position and labels) Used in a higher function

Usage

PlotInmexGraph(
  mSetObj,
  pathName,
  g,
  width = NA,
  height = NA,
  bg.color = NULL,
  line.color = NULL,
  format = "png",
  dpi = NULL
)

Arguments

mSetObj	Input name of the created mSet Object
pathName	Input the pathway name
g	Input the graph
width	Input the width, there are 2 default widths, the first, width = NULL, is 10.5. The second default is width = 0, where the width is 7.2. Otherwise users can input their own width.
height	Input the height of the graph to create
bg.color	Set the background color, default is set to NULL
line.color	Set the line color, default is set to NULL
format	image format
dpi	dpi of the image

Author(s)

Jeff Xia [e-mail] McGill University, Canada License: GNU GPL (>= 2)

xia-lab/MetaboAnalystR documentation built on Dec. 23, 2024, 3:44 p.m.