PlotMetpaPath: Plot KEGG pathway

In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data

Plot KEGG pathway

Description

Plot KEGG pathway

Usage

PlotMetpaPath(
  mSetObj = NA,
  pathName,
  width = NA,
  height = NA,
  format = "png",
  dpi = NULL
)

Arguments

mSetObj	Input name of the created mSet Object
pathName	Input the name of the selected KEGG pathway
width	Input the width, there are 2 default widths, the first, width = NULL, is 10.5. The second default is width = 0, where the width is 7.2. Otherwise users can input their own width.
height	height value for the image.
format	Select the image format, "png", or "pdf".
dpi	Input the dpi. If the image format is "pdf", users need not define the dpi. For "png" images, the default dpi is 72. It is suggested that for high-resolution images, select a dpi of 300.

Author(s)

Jeff Xia [e-mail] McGill University, Canada License: GNU GPL (>= 2)

xia-lab/MetaboAnalystR documentation built on Dec. 23, 2024, 3:44 p.m.