PlotORA: Plot over-representation analysis (ORA)

View source: R/enrich_graphics.R

PlotORAR Documentation

Plot over-representation analysis (ORA)

Description

Plot over-representation analysis (ORA)

Usage

PlotORA(mSetObj=NA, imgName, imgOpt, format="png", dpi=72, width=NA)

Arguments

mSetObj

Input the name of the created mSetObj (see InitDataObjects)

imgName

Input a name for the plot

imgOpt

"net"

format

Select the image format, "png", or "pdf".

dpi

Input the dpi. If the image format is "pdf", users need not define the dpi. For "png" images, the default dpi is 72. It is suggested that for high-resolution images, select a dpi of 300.

width

Input the width, there are 2 default widths, the first, width = NULL, is 10.5. The second default is width = 0, where the width is 7.2. Otherwise users can input their own width.

Author(s)

Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)


xia-lab/MetaboAnalystR documentation built on March 20, 2024, 7:28 p.m.